1.0  1 !  # total length genome in M ,  chrom
1000    ! # markers
100      ! # QTL
1      ! model effects
0 0
0 ! Store founder
0 0 0
0.42 5.4   ! QTL effect from a beta distribution
1      ! type of map   
1
1
1
1 ! type of markers
0.00025 0.0001  0.00025 ! Mutation rates
0     ! Initial LD
1     ! Typing error
0.005 0.005  0.01  !errSNP, errMST, missing genotypes
